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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
BLCA cis rs9815354 1 rs6789260 chr3:41776350 ULK4 chr3:41288091-42003660:- 0.64 9.46 3.23E-19 Diastolic blood pressure
BLCA cis rs10935120 1 rs6790466 chr3:134197740 ANAPC13 chr3:134196547-134204865:- 0.51 8.15 5.16E-15 Height
BLCA cis rs10935120 1 rs6790466 chr3:134197740 CEP63 chr3:134204575-134293852:+ 0.25 4.41 1.33E-5 Height
BLCA cis rs9815354 1 rs6790732 chr3:41864872 ULK4 chr3:41288091-42003660:- 0.64 9.96 6.34E-21 Diastolic blood pressure
BLCA cis rs9815354 1 rs6791806 chr3:41889995 ULK4 chr3:41288091-42003660:- 0.64 9.91 9.53E-21 Diastolic blood pressure
BLCA cis rs10935120 1 rs6793487 chr3:134299426 ANAPC13 chr3:134196547-134204865:- -0.47 -7.51 4.32E-13 Height
BLCA cis rs9815354 1 rs6796210 chr3:41851718 ULK4 chr3:41288091-42003660:- 0.65 10.07 2.66E-21 Diastolic blood pressure
BLCA cis rs9815354 1 rs6797165 chr3:41887777 ULK4 chr3:41288091-42003660:- 0.65 10.01 4.27E-21 Diastolic blood pressure
BLCA cis rs10935120 1 rs6800862 chr3:134228628 ANAPC13 chr3:134196547-134204865:- 0.47 7.68 1.39E-13 Height
BLCA cis rs9815354 1 rs6801343 chr3:41767234 ULK4 chr3:41288091-42003660:- 0.63 9.78 2.69E-20 Diastolic blood pressure
BLCA cis rs10935120 1 rs6801596 chr3:134252114 ANAPC13 chr3:134196547-134204865:- 0.47 7.54 3.54E-13 Height
BLCA cis rs9815354 1 rs6802340 chr3:41894034 ULK4 chr3:41288091-42003660:- 0.64 9.91 9.53E-21 Diastolic blood pressure
BLCA cis rs10935120 1 rs6802654 chr3:134217072 ANAPC13 chr3:134196547-134204865:- 0.49 7.8 6.04E-14 Height
BLCA cis rs10935120 1 rs6802654 chr3:134217072 CEP63 chr3:134204575-134293852:+ 0.24 4.09 5.17E-5 Height
BLCA cis rs1401999 1 rs6802849 chr3:183698943 ABCC5 chr3:183637726-183735727:- -0.21 -4.1 4.97E-5 Anterior chamber depth